inner_read_group_to_string
Converts a
ReadGroup struct to a String without any validation.WDL Version
1.1
RUN WITH
sprocket run --entrypoint inner_read_group_to_string data_structures/read_group.wdldata_structures\read_group.wdl [INPUTS]...
Inputs
Required Inputs
Name
Type
Description
read_groupReadGroupReadGroup struct to stringifyReadGroup struct to stringifyOther Inputs
Name
Type
Default
Description
format_as_sam_recordBooleanfalseFormat the
ReadGroup as a SAM record?Format the
ReadGroup as a SAM record?Outputs
Name
Type
Expression
Description
stringified_read_groupStringread_string("out.txt")Input
ReadGroup as a stringInput
ReadGroup as a stringDefault Runtime Attributes
Attribute
Value
container"ghcr.io/stjudecloud/util:3.0.1"maxRetries1